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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12372939 chr15:63996892 T/G VCX chrX:7810303-7812184:+ 0.34 6.02 4.03E-9 Box Plot
BLCA rs1237875 chr6:28173010 A/G BTN3A2 chr6:26365387-26378548:+ 0.32 6.04 3.68E-9 Box Plot
BLCA rs12405629 chr1:188684874 A/C GPR149 chr3:154055461-154147504:- 0.44 6.19 1.52E-9 Box Plot
BLCA rs12409027 chr1:165938936 G/C DPYSL2 chr8:26371538-26515694:+ 0.37 6.38 4.99E-10 Box Plot
BLCA rs12413658 chr10:4517721 C/T POU2F1 chr1:167190066-167396582:+ -0.4 -6.77 4.9E-11 Box Plot
BLCA rs12413658 chr10:4517721 C/T RPL19P12 chr7:102781796-102782386:- -0.36 -6.58 1.57E-10 Box Plot
BLCA rs12413931 chr10:105445588 C/T GPR32 chr19:51273721-51274989:+ 0.35 6 4.52E-9 Box Plot
BLCA rs12417635 chr11:63912728 C/T SBSN chr19:36014269-36019253:- -0.48 -6.01 4.4E-9 Box Plot
BLCA rs12425548 chr12:90456856 A/G KRTAP13-1 chr21:31768392-31769140:+ 0.18 6.11 2.45E-9 Box Plot
BLCA rs12432397 chr14:39764007 C/G LOC647288 chr13:75811890-75814517:- 0.41 7.04 8.96E-12 Box Plot
BLCA rs12434140 chr14:39806952 C/G LOC647288 chr13:75811890-75814517:- 0.43 7.33 1.35E-12 Box Plot
BLCA rs12448463 chr16:85065750 A/G KARS chr16:75661372-75682541:- -0.7 -6.12 2.34E-9 Box Plot
BLCA rs12448463 chr16:85065750 A/G WDR59 chr16:74905265-75034071:- -0.68 -5.97 5.48E-9 Box Plot
BLCA rs12457388 chr18:55205081 A/G C18orf54 chr18:51884287-51911588:+ -0.66 -6.07 3.12E-9 Box Plot
BLCA rs12457388 chr18:55205081 A/G KIAA1468 chr18:59854491-59975062:+ -0.66 -6.75 5.43E-11 Box Plot